nucleotides genome assembler benchmarking
OVERVIEW
NUCLEOTID.ES TRAFFIC
Date Range
Date Range
Date Range
LINKS TO DOMAIN
En este rincón compartimos ideas y código para resolver problemas de bioinformática. 9 de marzo de 2018. Growth of protein-DNA complexes in the Protein Data Bank. While checking the update logs of our good old 3D-footprint. A database of DNA-binding protein structures updated weekly from the Protein Data Bank. The nr95 bundle can be downloaded in PDB format at. 1 de marzo de 2018.
Software development, the happy path, and confirmation bias. An audio discussion of microbial sequencing. The economics of PacBio sequencing a microbe. Continuous, reproducible genome assembler benchmarking. Bioinformatics software is a disgrace to our field. Filtering inaccurate NGS reads using machine learning.
May 27th - 28th, NH Berlin Kurfürstendamm. Subscribe to the CAMI newsletter! Leave this field blank. CAMI metagenome assembly challenge closing soon! Travel stipends for joining the 1st CAMI evaluation meeting. CAMI Challenge is Now Open for Participation.
A computational biologists personal views on new technologies and publications on genomics and proteomics and their impact on drug discovery. Wednesday, March 21, 2018. A Most Unfortunate Sequencing Error. If you are in the sequencing business, youd like to get things right. Tuesday, March 06, 2018.
X2013; Jennifer Gardy keynote on open data and infectious diseases, plus workflow development. X2013; Talks on standards and a panel on growing communities.
WHAT DOES NUCLEOTID.ES LOOK LIKE?
NUCLEOTID.ES SERVER
SERVER OS AND ENCODING
We diagnosed that nucleotid.es is operating the AmazonS3 os.HTML TITLE
nucleotides genome assembler benchmarkingDESCRIPTION
continuous, objective and reproducible evaluation of genome assemblers using docker containersPARSED CONTENT
The website states the following, "Continuous, objective and reproducible evaluation of genome assemblers using docker containers." We viewed that the web site stated " Compare how different genome assemblers perform against a variety of test sequence data." It also said " Multiple different benchmarks shows the average performance of each assembler. Measured metrics include the size or accuracy of the assembly. Benchmarks include different GC content and genome sizes. Choose the assembler that best suits your own requirements and data." The header had docker as the highest ranking search term. This keyword is followed by linux containers, bioinformatics, and genomics which isn't as urgent as docker. The other words they uses is assembly.SEEK SUBSEQUENT BUSINESSES
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Department of Ecology and Evolutionary Biology. New Haven, CT 06520-8106, USA. We work with a variety of systems, both animals and plants, but have to date been particularly active addressing birds and terrestrial vertebrates. Map of Life and The Field Museum win MacArthur Foundation grant. New Yale Center for Biodiversity and Global Change, directed by Walter Jetz. Congratulations to Lab postdoc Carsten Meye.
Global Change Ecology and Evolution in the Sea. We study how and why marine ecosystems change. New York Times coverage today. Marine species respond rapidly to winter temperatures. New Brunswick, NJ 08901.
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